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Download for free: *******bit.ly/MolBioCell5thPDFFree In Molecular Biology of the Cell 5th Edition PDF, new material has been included on many topics, ranging from epigenetics, histone modifications, small RNAs, and comparative genomics, to genetic noise, cytoskeletal dynamics, cell-cycle control, apoptosis, stem cells, and novel cancer therapies. This book gives readers a conceptual framework for the mass of information that we now have about cells. Release information: Genre: Biological Science Type: PDF Release: November 16, 2007. Language: English Pages: 1725 (in PDF) Size: 220 MB Authors: Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, Peter Walter =========================================== Download for free: *******bit.ly/MolBioCell5thPDFFree =========================================== Molecular Biology of the Cell 5th Edition PDF Ebook Free Download Additional tags: alberts cell biology 5th edition alberts molecular biology of the cell 5th edition biology of the cell alberts molecular biology of the cell 5th edition Molecular Biology of the Cell 5th Edition download molecular biology of the cell 5th edition pdf Molecular Biology of the Cell 5th Edition pdf download molecular biology of the cell by bruce alberts molecular biology of the cell ebook Molecular Biology of the Cell fifth Molecular Biology of the Cell fifth edition molecular biology of the cell pdf the molecular biology of the cell 5th edition
11 Jun 2013
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Download for free: *******bit.ly/MolBioCell5thPDFFree In Molecular Biology of the Cell 5th Edition PDF, new material has been included on many topics, ranging from epigenetics, histone modifications, small RNAs, and comparative genomics, to genetic noise, cytoskeletal dynamics, cell-cycle control, apoptosis, stem cells, and novel cancer therapies. This book gives readers a conceptual framework for the mass of information that we now have about cells. Release information: Genre: Biological Science Type: PDF Release: November 16, 2007. Language: English Pages: 1725 (in PDF) Size: 220 MB Authors: Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, Peter Walter =========================================== Download for free: *******bit.ly/MolBioCell5thPDFFree =========================================== Molecular Biology of the Cell 5th Edition by Alberts PDF Download Additional tags: alberts cell biology 5th edition alberts molecular biology of the cell 5th edition biology of the cell alberts molecular biology of the cell 5th edition Molecular Biology of the Cell 5th Edition download molecular biology of the cell 5th edition pdf Molecular Biology of the Cell 5th Edition pdf download molecular biology of the cell by bruce alberts molecular biology of the cell ebook Molecular Biology of the Cell fifth Molecular Biology of the Cell fifth edition molecular biology of the cell pdf the molecular biology of the cell 5th edition
11 Jun 2013
2067
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The molecular biology enzymes and kits & reagents market is projected to reach USD 12.69 Billion by 2021 from USD 5.77 Billion in 2016, growing at a CAGR of 17.1% during the forecast period of 2016 to 2021.
14 Sep 2016
253
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10:22
Entire Durston video: *******vimeo****/1775160 Astonishing DNA complexity demolishes neo-Darwinism Alex Williams excerpt of paper: The astonishing complexity of the dynamic information storage capacity of the DNA/chromosome system is, in itself, a marvel of engineering design. Such a magnificent solution to such a monster logistics problem could surely only come from a Master Designer. But the nature of the majority of this information poses an impossible conundrum for neo-Darwinists. *******creation****/images/pdfs/tj/j21_3/j21_3_111-117.pdf The Capabilities of Chaos and Complexity: David L. Abel - Null Hypothesis For Information Generation - 2009 To focus the scientific communitys attention on its own tendencies toward overzealous metaphysical imagination bordering on wish-fulfillment, we propose the following readily falsifiable null hypothesis, and invite rigorous experimental attempts to falsify it: Physicodynamics cannot spontaneously traverse The Cybernetic Cut: physicodynamics alone cannot organize itself into formally functional systems requiring algorithmic optimization, computational halting, and circuit integration. *******www.mdpi****/1422-0067/10/1/247/pdf *******mdpi****/1422-0067/10/1/247/ag Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/
27 Sep 2010
518
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9:57
The Capabilities of Chaos and Complexity: David L. Abel - Null Hypothesis For Information Generation - 2009 To focus the scientific community’s attention on its own tendencies toward overzealous metaphysical imagination bordering on “wish-fulfillment,” we propose the following readily falsifiable null hypothesis, and invite rigorous experimental attempts to falsify it: "Physicodynamics cannot spontaneously traverse The Cybernetic Cut: physicodynamics alone cannot organize itself into formally functional systems requiring algorithmic optimization, computational halting, and circuit integration." A single exception of non trivial, unaided spontaneous optimization of formal function by truly natural process would falsify this null hypothesis. *******www.mdpi****/1422-0067/10/1/247/pdf *******mdpi****/1422-0067/10/1/247/ag Signature in the Cell - Book Review - Ken Peterson Excerpt: the “simplest extant cell, Mycoplasma genitalium — a tiny bacterium that inhabits the human urinary tract — requires ‘only’ 482 proteins to perform its necessary functions…(562,000 bases of DNA…to assemble those proteins).” ,,, amino acids have to congregate in a definite specified sequence in order to make something that “works.” First of all they have to form a “peptide” bond and this seems to only happen about half the time in experiments. Thus, the probability of building a chain of 150 amino acids containing only peptide links is about one chance in 10 to the 45th power. In addition, another requirement for living things is that the amino acids must be the “left-handed” version. But in “abiotic amino-acid production” the right- and left-handed versions are equally created. Thus, to have only left-handed, only peptide bonds between amino acids in a chain of 150 would be about one chance in 10 to the 90th. Moreover, in order to create a functioning protein the “amino acids, like letters in a meaningful sentence, must link up in functionally specified sequential arrangements.” It turns out that the probability for this is about one in 10 to the 74th. Thus, the probability of one functional protein of 150 amino acids forming by random chance is (1 in) 10 to the 164th. If we assume some minimally complex cell requires 250 different proteins then the probability of this arrangement happening purely by chance is one in 10 to the 164th multiplied by itself 250 times or one in 10 to the 41,000th power. *******www.spectrummagazine****/reviews/book_reviews/2009/10/06/signature_cell Intelligent Design: Required by Biological Life? K.D. Kalinsky - Pg. 11 Excerpt: It is estimated that the simplest life form would require at least 382 protein-coding genes. Using our estimate in Case Four of 700 bits of functional information required for the average protein, we obtain an estimate of about 267,000 bits for the simplest life form. Again, this is well above Inat and it is about 10^80,000 times more likely that ID (Intelligent Design) could produce the minimal genome than mindless natural processes. *******www.newscholars****/papers/ID%20Web%20Article.pdf Could Chance Arrange the Code for (Just) One Gene? "our minds cannot grasp such an extremely small probability as that involved in the accidental arranging of even one gene (10^-236)." *******www.creationsafaris****/epoi_c10.htm Estimating the prevalence of protein sequences adopting functional enzyme folds: Doug Axe: Excerpt: Starting with a weakly functional sequence carrying this signature, clusters of ten side-chains within the fold are replaced randomly, within the boundaries of the signature, and tested for function. The prevalence of low-level function in four such experiments indicates that roughly one in 10^64 signature-consistent sequences forms a working domain. Combined with the estimated prevalence of plausible hydropathic patterns (for any fold) and of relevant folds for particular functions, this implies the overall prevalence of sequences performing a specific function by any domain-sized fold may be as low as 1 in 10^77, adding to the body of evidence that functional folds require highly extraordinary sequences. *******www.ncbi.nlm.nih.gov/pubmed/15321723 Evolution vs. Functional Proteins - Doug Axe - Video *******www.metacafe****/watch/4018222/evolution_vs_functional_proteins_where_did_the_information_come_from_doug_axe_stephen_meyer/ Axe Diagram for finding a functional protein domain out of all sequence space: The y-axis can be seen as representing enzyme activity, and the x-axis represents all possible amino acid sequences. Enzymes sit at the peak of their fitness landscapes (Point A). There are extremely high levels of complex and specified information in proteins--informational sequences which point to intelligent design. *******www.evolutionnews****/axediagram.jpg Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/
22 Mar 2010
923
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8:31
"Charles Darwin said (paraphrase), 'If anyone could find anything that could not be had through a number of slight, successive, modifications, my theory would absolutely break down.' Well that condition has been met time and time again. Basically every gene, every protein fold. There is nothing of significance that we can show that can be had in a gradualist way. It's a mirage. None of it happens that way. - Doug Axe PhD. Experimental Evolution in Fruit Flies - October 2010 Excerpt: "This research really upends the dominant paradigm about how species evolve".,,, as stated in regards to the 35 year experimental failure to fixate a single beneficial mutation within fruit flies. *******www.arn****/blogs/index.php/literature/2010/10/07/experimental_evolution_in_fruit_flies Waiting Longer for Two Mutations - Michael J. Behe Excerpt: Citing malaria literature sources (White 2004) I had noted that the de novo appearance of chloroquine resistance in Plasmodium falciparum was an event of probability of 1 in 10^20. I then wrote that ‘‘for humans to achieve a mutation like this by chance, we would have to wait 100 million times 10 million years’’ (Behe 2007) (because that is the extrapolated time that it would take to produce 10^20 humans). Durrett and Schmidt (2008, p. 1507) retort that my number ‘‘is 5 million times larger than the calculation we have just given’’ using their model (which nonetheless "using their model" gives a prohibitively long waiting time of 216 million years). Their criticism compares apples to oranges. My figure of 10^20 is an empirical statistic from the literature; it is not, as their calculation is, a theoretical estimate from a population genetics model. *******www.discovery****/a/9461 Estimating the prevalence of protein sequences adopting functional enzyme folds: Doug Axe: Excerpt: Starting with a weakly functional sequence carrying this signature, clusters of ten side-chains within the fold are replaced randomly, within the boundaries of the signature, and tested for function. The prevalence of low-level function in four such experiments indicates that roughly one in 10^64 signature-consistent sequences forms a working domain. Combined with the estimated prevalence of plausible hydropathic patterns (for any fold) and of relevant folds for particular functions, this implies the overall prevalence of sequences performing a specific function by any domain-sized fold may be as low as 1 in 10^77, adding to the body of evidence that functional folds require highly extraordinary sequences. *******www.ncbi.nlm.nih.gov/pubmed/15321723 Evolution vs. Functional Proteins - Doug Axe - Video *******www.metacafe****/watch/4018222 Stephen Meyer - Functional Proteins And Information For Body Plans - video *******www.metacafe****/watch/4050681 This following video is a bit more clear for explaining exactly why mutations to the DNA do not control Body Plan morphogenesis, since the mutations are the ‘bottom rung of the ladder’ as far as the 'higher levels of the layered information’ of the cell are concerned: Stephen Meyer on Craig Venter, Complexity Of The Cell & Layered Information *******www.metacafe****/watch/4798685 "The evidence for the adaptive divergence of gene switches is still thin. The best case involves the loss of protective armor and spines in sticklebacks, both due to changes in regulatory elements. But these elements represent the loss of traits, rather than the origin of evolutionary novelties...We now know that Hox genes and other transcription factors have many roles besides inducing body pattern, and their overall function in development - let alone in evolution - remains murky." *******www.evolutionnews****/2010/06/scott_f_gilbert_developmental035931.html Here is a more thorough critique of evo-devo: Nature's "Gems": Microevolution Meets Microevolution - Casey Luskin - August 2010 *******www.evolutionnews****/2010/08/nature_gems_microevolution_mee037171.html#more Cortical Inheritance: The Crushing Critique Against Genetic Reductionism - Arthur Jones - video *******www.metacafe****/watch/4187488 Astonishingly, actual motors, which far surpass man-made motors in 'engineering parameters', are now being found inside 'simple cells'. Articles and Videos on Molecular Motors *******docs.google****/Doc?docid=0AYmaSrBPNEmGZGM4ejY3d3pfMzlkNjYydmRkZw&hl=en Michael Behe - Life Reeks Of Design - 2010 - video *******www.metacafe****/watch/5066181 And in spite of the fact of finding molecular motors permeating the simplest of bacterial life, there are no detailed Darwinian accounts for the evolution of even one such motor or system. "There are no detailed Darwinian accounts for the evolution of any fundamental biochemical or cellular system only a variety of wishful speculations. It is remarkable that Darwinism is accepted as a satisfactory explanation of such a vast subject." James Shapiro - Molecular Biologist The following expert doesn't even hide his very unscientific preconceived philosophical bias against intelligent design,,, ‘We should reject, as a matter of principle, the substitution of intelligent design for the dialogue of chance and necessity,,, Yet at the same time the same expert readily admits that neo-Darwinism has ZERO evidence for the chance and necessity of material processes producing any cellular system whatsoever,,, ,,,we must concede that there are presently no detailed Darwinian accounts of the evolution of any biochemical or cellular system, only a variety of wishful speculations.’ Franklin M. Harold,* 2001. The way of the cell: molecules, organisms and the order of life, Oxford University Press, New York, p. 205. Professor Emeritus of Biochemistry, Colorado State University, USA Michael Behe - No Scientific Literature For Evolution of Any Irreducibly Complex Molecular Machines *******www.metacafe****/watch/5302950/ “The response I have received from repeating Behe's claim about the evolutionary literature, which simply brings out the point being made implicitly by many others, such as Chris Dutton and so on, is that I obviously have not read the right books. There are, I am sure, evolutionists who have described how the transitions in question could have occurred.” And he continues, “When I ask in which books I can find these discussions, however, I either get no answer or else some titles that, upon examination, do not, in fact, contain the promised accounts. That such accounts exist seems to be something that is widely known, but I have yet to encounter anyone who knows where they exist.” David Ray Griffin - retired professor of philosophy of religion and theology Poly-Functional Complexity equals Poly-Constrained Complexity *******docs.google****/Doc?docid=0AYmaSrBPNEmGZGM4ejY3d3pfMjdoZmd2emZncQ DNA - Evolution Vs. Polyfuctionality - video *******www.metacafe****/watch/4614519 Bio-Complexity *******bio-complexity****/ojs/index.php/main/issue/view/24 Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/2009/10/intelligent-design-anthropic-hypothesis_19.html
15 Oct 2010
2137
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1:43
The Animators: Light Productions Video Services - Cambrian Animals From Darwin's Dillemma *******www.lightproductionsvideo****/Cambrian-Animals.html The Producers: Illustra Media *******illustramedia****/ Articles and Videos on Molecular Machines and Motors *******docs.google****/Doc?docid=0AYmaSrBPNEmGZGM4ejY3d3pfMzlkNjYydmRkZw&hl=en Stephen Meyer - Functional Proteins And Information For Body Plans - video *******www.metacafe****/watch/4050681 Michael Behe - Life Reeks Of Design - 2010 - video *******www.metacafe****/watch/5066181 And in spite of the fact of finding molecular machines and motors permeating the simplest of bacterial life, there are no detailed Darwinian accounts for the evolution of even one such motor or system. "There are no detailed Darwinian accounts for the evolution of any fundamental biochemical or cellular system only a variety of wishful speculations. It is remarkable that Darwinism is accepted as a satisfactory explanation of such a vast subject." James Shapiro - Molecular Biologist The following expert doesn't even hide his very unscientific preconceived philosophical bias against intelligent design,,, ‘We should reject, as a matter of principle, the substitution of intelligent design for the dialogue of chance and necessity,,, Yet at the same time the same expert readily admits that neo-Darwinism has ZERO evidence for the chance and necessity of material processes producing any cellular system whatsoever,,, ,,,we must concede that there are presently no detailed Darwinian accounts of the evolution of any biochemical or cellular system, only a variety of wishful speculations.’ Franklin M. Harold,* 2001. The way of the cell: molecules, organisms and the order of life, Oxford University Press, New York, p. 205. *Professor Emeritus of Biochemistry, Colorado State University, USA Michael Behe - No Scientific Literature For Evolution of Any Irreducibly Complex Molecular Machines *******www.metacafe****/watch/5302950/ “The response I have received from repeating Behe's claim about the evolutionary literature, which simply brings out the point being made implicitly by many others, such as Chris Dutton and so on, is that I obviously have not read the right books. There are, I am sure, evolutionists who have described how the transitions in question could have occurred.” And he continues, “When I ask in which books I can find these discussions, however, I either get no answer or else some titles that, upon examination, do not, in fact, contain the promised accounts. That such accounts exist seems to be something that is widely known, but I have yet to encounter anyone who knows where they exist.” David Ray Griffin - retired professor of philosophy of religion and theology What I find very persuasive, to the suggestion that the universe was designed with life in mind, is that physicists find many processes in a cell operate at the 'near optimal' capacities allowed in any physical system: William Bialek - Professor Of Physics - Princeton University: Excerpt: "A central theme in my research is an appreciation for how well things “work” in biological systems. It is, after all, some notion of functional behavior that distinguishes life from inanimate matter, and it is a challenge to quantify this functionality in a language that parallels our characterization of other physical systems. Strikingly, when we do this (and there are not so many cases where it has been done!), the performance of biological systems often approaches some limits set by basic physical principles. While it is popular to view biological mechanisms as an historical record of evolutionary and developmental compromises, these observations on functional performance point toward a very different view of life as having selected a set of near optimal mechanisms for its most crucial tasks.,,,The idea of performance near the physical limits crosses many levels of biological organization, from single molecules to cells to perception and learning in the brain,,,," *******www.princeton.edu/~wbialek/wbialek.html Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/2009/10/intelligent-design-anthropic-hypothesis_19.html
5 Feb 2011
2261
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6:42
The Capabilities of Chaos and Complexity: David L. Abel - Null Hypothesis For Information Generation - 2009 To focus the scientific community's attention on its own tendencies toward overzealous metaphysical imagination bordering on wish-fulfillment, we propose the following readily falsifiable null hypothesis, and invite rigorous experimental attempts to falsify it: Physicodynamics cannot spontaneously traverse The Cybernetic Cut: physicodynamics alone cannot organize itself into formally functional systems requiring algorithmic optimization, computational halting, and circuit integration. *******www.mdpi****/1422-0067/10/1/247/pdf *******mdpi****/1422-0067/10/1/247/ag "LIFES CONSERVATION LAW: Why Darwinian Evolution Cannot Create Biological Information": Excerpt: Though not denying Darwinian evolution or even limiting its role in the history of life, the Law of Conservation of Information shows that Darwinian evolution is inherently teleological. Moreover, it shows that this teleology can be measured in precise information-theoretic terms. (Dr. Dembski points out that the Conservation Law is clearly differentiated from the common definition of Theistic Evolution since mainstream Theistic evolutionists, such as Ken Miller and Francis Collins, hold that the Design found in life is not separable from the purely natural processes of Darwinian evolution, whereas Dembski and Marks are clearly saying the Design/Information found in life is detectable, can be separated from the natural processes we see in the universe, and "can be measured in precise information-theoretic terms".) *******www.evoinfo****/Publications/ConsInfo_NoN.pdf Mathematically Defining Functional Information In Molecular Biology - Kirk Durston - short video *******www.youtube****/watch?v=vUeCgTN7pOo Astonishing DNA complexity demolishes neo-Darwinism Alex Williams excerpt of paper: The astonishing complexity of the dynamic information storage capacity of the DNA/chromosome system is, in itself, a marvel of engineering design. Such a magnificent solution to such a monster logistics problem could surely only come from a Master Designer. But the nature of the majority of this information poses an impossible conundrum for neo-Darwinists. *******creation****/images/pdfs/tj/j21_3/j21_3_111-117.pdf Conservation of Information in Computer Search (COI) - William A. Dembski - Robert J. Marks II - Dec. 2009 Excerpt: COI puts to rest the inflated claims for the information generating power of evolutionary simulations such as Avida and ev. *******marksmannet****/RobertMarks/REPRINTS/2009_BernoullisPrinciple.pdf "... no operation performed by a computer can create new information." Douglas G. Robertson, "Algorithmic Information Theory, Free Will and the Turing Test," Complexity, Vol.3, #3 Jan/Feb 1999, pp. 25-34. The Evolutionary Informatics Lab: *******www.evoinfo****/index.html Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/
9 Jan 2010
426
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5:31
The first thought I had when I saw the bacteriophage virus is that it looks similar to the lunar lander of the Apollo program. The comparison is not without merit considering some of the relative distances to be traveled and the virus must somehow possess, as of yet unelucidated, orientation, guidance, docking, unloading, loading, etc... mechanisms. And please remember this level of complexity exists in a world that is far too small to be seen with the naked eye. This excellent video gives a small glimpse at the intricate, and humbling, complexity that goes into crafting the "simple" non-living bacteriophage virus. For anyone who has a molecular biology project they would like to bring to life with such stunning animation, please contact: Seyet LLC - Life Science Animation | Visual Communication Company *******www.seyet****/ "There are no detailed Darwinian accounts for the evolution of any fundamental biochemical or cellular system only a variety of wishful speculations. It is remarkable that Darwinism is accepted as a satisfactory explanation of such a vast subject." James Shapiro - Molecular Biologist CELL TO VIRUS - SIZE AND SCALE - Move Cursor At Bottom Of Graph To Zoom In *******learn.genetics.utah.edu/content/begin/cells/scale/ The Capabilities of Chaos and Complexity: David L. Abel - Null Hypothesis For Information Generation - 2009 To focus the scientific communitys attention on its own tendencies toward overzealous metaphysical imagination bordering on wish-fulfillment, we propose the following readily falsifiable null hypothesis, and invite rigorous experimental attempts to falsify it: "Physicodynamics cannot spontaneously traverse The Cybernetic Cut: physicodynamics alone cannot organize itself into formally functional systems requiring algorithmic optimization, computational halting, and circuit integration." A single exception of non trivial, unaided spontaneous optimization of formal function by truly natural process would falsify this null hypothesis. *******www.mdpi****/1422-0067/10/1/247/pdf *******mdpi****/1422-0067/10/1/247/ag Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/
20 Jan 2010
7479
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10:00
"I have seen estimates of the incidence of the ratio of deleterious-to-beneficial mutations which range from one in one thousand up to one in one million. The best estimates seem to be one in one million (Gerrish and Lenski, 1998). The actual rate of beneficial mutations is so extremely low as to thwart any actual measurement (Bataillon, 2000, Elena et al, 1998). Therefore, I cannot ...accurately represent how rare such beneficial mutations really are." (J.C. Sanford; Genetic Entropy page 24) - 2005 Estimation of spontaneous genome-wide mutation rate parameters: whither beneficial mutations? (Thomas Bataillon) Abstract......It is argued that, although most if not all mutations detected in mutation accumulation experiments are deleterious, the question of the rate of favourable mutations (and their effects) is still a matter for debate. *******www.nature****/hdy/journal/v84/n5/full/6887270a.html Distribution of fitness effects caused by random insertion mutations in Escherichia coli Excerpt: At least 80% of the mutations had a significant negative effect on fitness, whereas none of the mutations had a significant positive effect. *******www.springerlink****/content/r37w1hrq5l0q3832/ High Frequency of Cryptic Deleterious Mutations in Caenorhabditis elegans ( Esther K. Davies, Andrew D. Peters, Peter D. Keightley) "In fitness assays, only about 4 percent of the deleterious mutations fixed in each line were detectable. The remaining 96 percent, though cryptic, are significant for mutation load...the presence of a large class of mildly deleterious mutations can never be ruled out. " *******www.sciencemag****/cgi/content/abstract/285/5434/1748 But in all the reading Ive done in the life-sciences literature, Ive never found a mutation that added information All point mutations that have been studied on the molecular level turn out to reduce the genetic information and not increase it. Lee Spetner - Ph.D. Physics - MIT - (Not By Chance: Shattering the Modern Theory of Evolution) "Bergman (2004) has studied the topic of beneficial mutations. Among other things, he did a simple literature search via Biological Abstracts and Medline. He found 453,732 mutation hits, but among these only 186 mentioned the word beneficial (about 4 in 10,000). When those 186 references were reviewed, almost all the presumed beneficial mutations were only beneficial in a very narrow sense- but each mutation consistently involved loss of function changes-hence loss of information. Sanford: Genetic Entropy Mutations, in summary, tend to induce sickness, death, or deficiencies. No evidence in the vast literature of heredity change shows unambiguous evidence that random mutation itself, even with geographical isolation of populations leads to speciation. Lynn Margulis - Acquiring Genomes [2003], p. 29. But there is no evidence that DNA mutations can provide the sorts of variation needed for evolution There is no evidence for beneficial mutations at the level of macroevolution, but there is also no evidence at the level of what is commonly regarded as microevolution. Jonathan Wells (PhD. - Molecular Biology) Evolution vs. Genetic Entropy - video *******www.youtube****/watch?v=mmbRbyv2PA0 Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/
27 May 2010
1530
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9:12
Here Is the entire video: The Return of the God Hypothesis - Stephen Meyer - video: *******www.watermarkradio****/index.php?id=153&channel=237&series=140&message=0 Article: *******www.arn****/docs/meyer/sm_returnofgod.pdf Here is a site where you can order Dr. Meyer's book: SIGNATURE IN THE CELL by Stephen C. Meyer *******www.signatureinthecell****/ Journey Inside The Cell - DNA to mRNA to Proteins - Stephen Meyer - Signature In The Cell - video *******www.youtube****/watch?v=1fiJupfbSpg Evolution vs ATP Synthase - Molecular Machine - video *******www.metacafe****/watch/4012706/evolution_vs_atp_synthase_molecular_machine/ "There are no detailed Darwinian accounts for the evolution of any fundamental biochemical or cellular system only a variety of wishful speculations. It is remarkable that Darwinism is accepted as a satisfactory explanation of such a vast subject." James Shapiro - Molecular Biologist Virus - Assembly Of A Nano-Machine - video *******www.metacafe****/watch/4023122/the_virus_assembly_of_a_molecular_machine_intelligent_design/ Bacterial Flagellum - A Sheer Wonder Of Intelligent Design - video *******www.metacafe****/watch/3994630/bacterial_flagellum_a_sheer_wonder_of_intelligent_design/ Michael Behe on Falsifying Intelligent Design - video *******www.youtube****/watch?v=N8jXXJN4o_A Richard Dawkins - EXPELLED - The UFO Interview - video *******www.youtube****/watch?v=GlZtEjtlirc Mathematically Defining Functional Information In Molecular Biology - Kirk Durston - short video *******www.metacafe****/watch/3995236/mathematically_defining_functional_information_in_molecular_biology_kirk_durston/ Entire video: *******vimeo****/1775160 William Bialek - Professor Of Physics - Princeton University: Excerpt: "A central theme in my research is an appreciation for how well things “work” in biological systems. It is, after all, some notion of functional behavior that distinguishes life from inanimate matter, and it is a challenge to quantify this functionality in a language that parallels our characterization of other physical systems. Strikingly, when we do this (and there are not so many cases where it has been done!), the performance of biological systems often approaches some limits set by basic physical principles. While it is popular to view biological mechanisms as an historical record of evolutionary and developmental compromises, these observations on functional performance point toward a very different view of life as having selected a set of near optimal mechanisms for its most crucial tasks." *******www.princeton.edu/~wbialek/wbialek.html Ben Stein - EXPELLED - The Complexity of the Cell - video *******www.metacafe****/watch/4018253/expelled_complexity_of_the_cell/ Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/
16 Apr 2010
5588
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9:41
Molecular Machine Bacterial Flagella - A Paradigm For Intelligent Design - Scott Minnich - entire video *******www.vimeo****/9032112 Scott Minnich homepage: *******www.cals.uidaho.edu/mmbb/minnich.asp The best known example for irreducible complexity, and thus for Intelligent Design, in molecular biology has become the bacterial flagellum. Bacterial Flagellum - A Sheer Wonder Of Intelligent Design - video *******www.metacafe****/watch/3994630/bacterial_flagellum_a_sheer_wonder_of_intelligent_design/ Biologist Howard Berg at Harvard calls the Bacterial Flagellum “the most efficient machine in the universe." The flagellum has steadfastly resisted all attempts to elucidate its plausible origination by Darwinian processes, much less has anyone ever actually evolved a flagellum from scratch in the laboratory; Genetic Entropy Refutation of Nick Matzke's TTSS (type III secretion system) to Flagellum Evolutionary Narrative: Excerpt: Comparative genomic analysis show that flagellar genes have been differentially lost in endosymbiotic bacteria of insects. Only proteins involved in protein export within the flagella assembly pathway (type III secretion system and the basal-body) have been kept... *******mbe.oxfordjournals****/cgi/content/abstract/msn153v1 "One fact in favour of the flagellum-first view is that bacteria would have needed propulsion before they needed T3SSs, which are used to attack cells that evolved later than bacteria. Also, flagella are found in a more diverse range of bacterial species than T3SSs. ‘The most parsimonious explanation is that the T3SS arose later," Howard Ochman - Biochemist - New Scientist (Feb 16, 2008) Michael Behe on Falsifying Intelligent Design - video *******www.youtube****/watch?v
7 Mar 2010
1238
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4:59
Entire video: Wonders of the Cell - Chris Ashcraft *******www.youtube****/watch?v=OQks3COscX4 Electron Microscope Photograph of Flagellum Hook-Basal Body *******www.skeptic****/eskeptic/08-08-20images/figure03.jpg Bacterial Flagellum: Visualizing the Complete Machine In Situ Excerpt: Electron tomography of frozen-hydrated bacteria, combined with single particle averaging, has produced stunning images of the intact bacterial flagellum, revealing features of the rotor, stator and export apparatus. *******www.sciencedirect****/science?_ob=ArticleURL&_udi=B6VRT-4M8WTCF-K&_user=10&_coverDate=11%2F07%2F2006&_rdoc=1&_fmt=full&_orig=search&_cdi=6243&_sort=d&_docanchor=&view=c&_acct=C000050221&_version=1&_urlVersion=0&_userid=10&md5=8d7e0ad266148c9d917cf0c2a9d12e82&artImgPref=F Bacterial Flagellum - A Sheer Wonder Of Intelligent Design - video *******www.metacafe****/watch/3994630 Biologist Howard Berg at Harvard calls the Bacterial Flagellum “the most efficient machine in the universe." I would like to reiterate, Darwinism postulated a very simple first cell, yet the simplest cell scientists have been able to find on earth, which can't even be seen with the naked eye, is vastly more complex than any machine man has ever made through concerted effort. This is self evident since a cell can self-replicate with seeming ease whereas a machine cannot. This following site has a interactive graph that lets people look into this 'invisible' world of microbes: CELL TO CARBON ATOM - SIZE AND SCALE - Interactive Graph - Move cursor at the bottom of graph to the right to reduce the size: *******learn.genetics.utah.edu/content/begin/cells/scale/ The smallest cyano-bacterium known to science has hundreds of millions of individual atomic molecules (not counting water molecules), divided into nearly a thousand completely distinct atomic molecule types; and a genome (DNA sequence) of 1.8 million bits, with over a million individual protein molecules which are sub-divided into hundreds of distinct protein classes. Once again, the complexity found in the simplest bacterium known to science easily outclasses the complexity of any machine man has made. These following articles and videos make this point clear: "The manuals needed for building the entire space shuttle and all its components and all its support systems would be truly enormous! Yet the specified complexity (information) of even the simplest form of life - a bacterium - is arguably as great as that of the space shuttle." J.C. Sanford - Geneticist - Genetic Entropy and the Mystery Of the Genome 'The information content of a simple cell has been estimated as around 10^12 bits, comparable to about a hundred million pages of the Encyclopedia Britannica." Carl Sagan, "Life" in Encyclopedia Britannica: Macropaedia (1974 ed.), pp. 893-894 of note: The 10^12 bits of information number for a bacterium is derived from entropic considerations, which is, due to the tightly integrated relationship between information and entropy, considered the most accurate measure of the transcendent information present in a 'simple' life form. For calculations please see the following site: Molecular Biophysics – Information theory. Relation between information and entropy: *******www.astroscu.unam.mx/~angel/tsb/molecular.htm Ben Stein - EXPELLED - The Staggering Complexity Of The Cell - video *******www.metacafe****/watch/4227700 “Although the tiniest living things known to science, bacterial cells, are incredibly small (10^-12 grams), each is a veritable micro-miniaturized factory containing thousands of elegantly designed pieces of intricate molecular machinery, made up altogether of one hundred thousand million atoms, far more complicated than any machine built by man and absolutely without parallel in the non-living world”. Michael Denton, "Evolution: A Theory in Crisis," 1986, p. 250. Nanoelectronic Transistor Combined With Biological Machine Could Lead To Better Electronics: - Aug. 2009 Excerpt: While modern communication devices rely on electric fields and currents to carry the flow of information, biological systems are much more complex. They use an arsenal of membrane receptors, channels and pumps to control signal transduction that is unmatched by even the most powerful computers. *******www.sciencedaily****/releases/2009/08/090811091834.htm The Cell as a Collection of Protein Machines "We have always underestimated cells. Undoubtedly we still do today,,, Indeed, the entire cell can be viewed as a factory that contains an elaborate network of interlocking assembly lines, each which is composed of a set of large protein machines." Bruce Alberts: Former President, National Academy of Sciences; *******www.imbb.forth.gr/people/aeconomou/documents/Alberts98.pdf The Cell - A World Of Complexity Darwin Never Dreamed Of - Donald E. Johnson - video *******www.metacafe****/watch/4139390 Entire video: *******www.ideaclubtcw****/video/DEJohnson.html Bioinformatics: The Information in Life - Donald Johnson - video *******vimeo****/11314902 On a slide in the preceding video, entitled 'Information Systems In Life', Dr. Johnson points out that: * the genetic system is a pre-existing operating system; * the specific genetic program (genome) is an application; * the native language has codon-based encryption system; * the codes are read by enzyme computers with their own operating system; * each enzyme’s output is to another operating system in a ribosome; * codes are decrypted and output to tRNA computers; * each codon-specified amino acid is transported to a protein construction site; and * in each cell, there are multiple operating systems, multiple programming languages, encoding/decoding hardware and software, specialized communications systems, error detection/correction systems, specialized input/output for organelle control and feedback, and a variety of specialized “devices” to accomplish the tasks of life. Cells Are Like Robust Computational Systems, - June 2009 Excerpt: Gene regulatory networks in cell nuclei are similar to cloud computing networks, such as Google or Yahoo!, researchers report today in the online journal Molecular Systems Biology. The similarity is that each system keeps working despite the failure of individual components, whether they are master genes or computer processors. ,,,,"We now have reason to think of cells as robust computational devices, employing redundancy in the same way that enables large computing systems, such as Amazon, to keep operating despite the fact that servers routinely fail." *******www.sciencedaily****/releases/2009/06/090616103205.htm Systems biology: Untangling the protein web - July 2009 Excerpt: Vidal thinks that technological improvements — especially in nanotechnology, to generate more data, and microscopy, to explore interaction inside cells, along with increased computer power — are required to push systems biology forward. "Combine all this and you can start to think that maybe some of the information flow can be captured," he says. But when it comes to figuring out the best way to explore information flow in cells, Tyers jokes that it is like comparing different degrees of infinity. "The interesting point coming out of all these studies is how complex these systems are — the different feedback loops and how they cross-regulate each other and adapt to perturbations are only just becoming apparent," he says. "The simple pathway models are a gross oversimplification of what is actually happening." *******www.nature****/nature/journal/v460/n7253/full/460415a.html Simulations reveal new information about the gateway to the cell nucleus Excerpt: “There are whole machines in living cells that are made of hundreds or thousands of proteins,” says Schulten, “and the nuclear pore is one of those systems. It’s actually one of the most magnificent systems in the cell.”,,,Hundreds to thousands of NPCs are embedded in the nuclear envelope of each cell,"... *******www.psc.edu/science/2006/schulten/ Life Leads the Way to Invention - Feb. 2010 Excerpt: a cell is 10,000 times more energy-efficient than a transistor. “ In one second, a cell performs about 10 million energy-consuming chemical reactions, which altogether require about one picowatt (one millionth millionth of a watt) of power.” This and other amazing facts lead to an obvious conclusion: inventors ought to look to life for ideas.,,, Essentially, cells may be viewed as circuits that use molecules, ions, proteins and DNA instead of electrons and transistors. That analogy suggests that it should be possible to build electronic chips – what Sarpeshkar calls “cellular chemical computers” – that mimic chemical reactions very efficiently and on a very fast timescale. *******creationsafaris****/crev201002.htm#20100226a This stunning energy efficiency of a cell is found across all life domains, thus strongly suggesting that all life on earth was Intelligently Design for maximal efficiency instead of accidentally, and gradually, evolved: Mean mass-specific metabolic rates are strikingly similar across life's major domains: Evidence for life's metabolic optimum Excerpt: Here, using the largest database to date, for 3,006 species that includes most of the range of biological diversity on the planet—from bacteria to elephants, and algae to sapling trees—we show that metabolism displays a striking degree of homeostasis across all of life. *******www.ncbi.nlm.nih.gov/pmc/articles/PMC2572558/ Also of interest is that a cell apparently seems to be successfully designed along the very stringent guidelines laid out by Landauer's principle of 'reversible computation' in order to achieve such amazing energy efficiency, something man has yet to accomplish in any meaningful way for computers: Notes on Landauer’s principle, reversible computation, and Maxwell’s Demon - Charles H. Bennett Excerpt: Of course, in practice, almost all data processing is done on macroscopic apparatus, dissipating macroscopic amounts of energy far in excess of what would be required by Landauer’s principle. Nevertheless, some stages of biomolecular information processing, such as transcription of DNA to RNA, appear to be accomplished by chemical reactions that are reversible not only in principle but in practice.,,,, *******www.hep.princeton.edu/~mcdonald/examples/QM/bennett_shpmp_34_501_03.pdf Further quotes on the unmatched complexity of the cell: “Each cell with genetic information, from bacteria to man, consists of artificial languages and their decoding systems, memory banks for information storage and retrieval, elegant control systems regulating the automated assembly of parts and components, error fail-safe and proof-reading devices utilized for quality control, assembly processes involving the principle of prefabrication and modular construction and a capacity not equaled in any of our most advanced machines, for it would be capable of replicating its entire structure within a matter of a few hours" Geneticist Michael Denton PhD. Evolution: A Theory In Crisis pg. 329 "To grasp the reality of life as it has been revealed by molecular biology, we must first magnify a cell a thousand million times until it is 20 kilometers in diameter and resembles a giant airship large enough to cover a great city like London or New York. What we would see then would be an object of unparalleled complexity,...we would find ourselves in a world of supreme technology and bewildering complexity." Geneticist Michael Denton PhD., Evolution: A Theory In Crisis, pg.328 Building a Cell: Staggering Complexity: - Feb. 2010 Excerpt: “All organisms, from bacteria to humans, face the daunting task of replicating, packaging and segregating up to two metres (about 6 x 10^9 base pairs) of DNA when each cell divides,” “,,,the segregation machinery must function with far greater accuracy than man-made machines and with an exquisitely soft touch to prevent the DNA strands from breaking.” Bloom and Joglekar talked “machine language” over and over. The cell has specialized machines for all kinds of tasks: segregation machines, packaging machines, elaborate machines, streamlined machines, protein translocation machines, DNA-processing machines, DNA-translocation machines, robust macromolecular machines, accurate machines, ratchets, translocation pumps, mitotic spindles, DNA springs, coupling devices, and more. The authors struggle to “understand how these remarkable machines function with such exquisite accuracy.” *******www.creationsafaris****/crev201002.htm#20100202a Here is a good article that came out in GN magazine in Nov. 2009: 10 Ways Darwin Got It Wrong Excerpt: As molecular biologist Jonathan Wells and mathematician William Dembski point out: “It’s true that eukaryotic cells are the most complicated cells we know. But the simplest life forms we know, the prokaryotic cells (such as bacteria, which lack a nucleus), are themselves immensely complex.,,, There is no evidence whatsoever of earlier, more primitive life forms from which prokaryotes might have evolved” (How to Be an Intellectually Fulfilled Atheist (or Not), 2008, p. 4). These authors then mention what these two types of cells share in terms of complexity: • Information processing, storage and retrieval. • Artificial languages and their decoding systems. • Error detection, correction and proofreading devices for quality control. • Digital data-embedding technology. • Transportation and distribution systems. • Automated parcel addressing (similar to zip codes and UPS labels). • Assembly processes employing pre-fabrication and modular construction. • Self-reproducing robotic manufacturing plants. So it turns out that cells are far more complex and sophisticated than Darwin could have conceived of. How did mere chance produce this, when even human planning and engineering cannot? *******www.gnmagazine****/issues/gn85/10-ways-darwin-wrong.htm There simply is no "simple life" on earth as materialism had presumed - even the well known single celled amoeba has the complexity of the city of London and reproduces that complexity in only 20 minutes. The inner life of a cell - Harvard University - video *******www.youtube****/watch?v=mbcWGU8fpxA User's guide to the video *******sparkleberrysprings****/innerlifeofcell.html Here is a fairly simple to understand basic overview of the cell: How the Body Works: The Cell - video *******www.youtube****/watch?v=NiiLS_ovLwM Map Of Major Metabolic Pathways In A Cell - Diagram *******www.sigmaaldrich****/img/assets/4202/MetabolicPathways_6_17_04_.pdf Metabolism: A Cascade of Design Excerpt: A team of biological and chemical engineers wanted to understand just how robust metabolic pathways are. To gain this insight, the researchers compared how far the errors cascade in pathways found in a variety of single-celled organisms with errors in randomly generated metabolic pathways. They learned that when defects occur in the cell’s metabolic pathways, they cascade much shorter distances than when errors occur in random metabolic routes. Thus, it appears that metabolic pathways in nature are highly optimized and unusually robust, demonstrating that metabolic networks in the protoplasm are not haphazardly arranged but highly organized. *******www.reasons****/metabolism-cascade-design Making the Case for Intelligent Design More Robust Excerpt: ,,, In other words, metabolic pathways are optimized to withstand inevitable concentration changes of metabolites. *******www.reasons****/making-case-intelligent-design-more-robust Wonders of the Cell - 2008 - Christopher Wayne Ashcraft - video *******video.google****/videoplay?docid=-509988235357380896 Primary Cilium As Cellular 'GPS System' Crucial To Wound Repair Excerpt: The primary cilium, the solitary, antenna-like structure that studs the outer surfaces of virtually all human cells, orient cells to move in the right direction and at the speed needed to heal wounds, much like a Global Positioning System helps ships navigate to their destinations. "What we are dealing with is a physiological analogy to the GPS system with a coupled autopilot that coordinates air traffic or tankers on open sea," *******www.sciencedaily****/releases/2008/12/081217190330.htm Mere Biochemistry: Cell Division Involves Thousands of Complex, Interacting Parts - September 2010 *******www.creationsafaris****/crev201009.htm#20100925a Astonishingly, actual motors, which far surpass man-made motors in 'engineering parameters', are now being found inside 'simple cells'. Articles and Videos on Molecular Motors *******docs.google****/Doc?docid=0AYmaSrBPNEmGZGM4ejY3d3pfMzlkNjYydmRkZw&hl=en Michael Behe - Life Reeks Of Design - 2010 - video *******www.metacafe****/watch/5066181 And in spite of the fact of finding molecular motors permeating the simplest of bacterial life, there are no detailed Darwinian accounts for the evolution of even one such motor or system. "There are no detailed Darwinian accounts for the evolution of any fundamental biochemical or cellular system only a variety of wishful speculations. It is remarkable that Darwinism is accepted as a satisfactory explanation of such a vast subject." James Shapiro - Molecular Biologist The following expert doesn't even hide his very unscientific preconceived philosophical bias against intelligent design,,, ‘We should reject, as a matter of principle, the substitution of intelligent design for the dialogue of chance and necessity,,, Yet at the same time the same expert readily admits that neo-Darwinism has ZERO evidence for the chance and necessity of material processes producing any cellular system whatsoever,,, ,,,we must concede that there are presently no detailed Darwinian accounts of the evolution of any biochemical or cellular system, only a variety of wishful speculations.’ Franklin M. Harold,* 2001. The way of the cell: molecules, organisms and the order of life, Oxford University Press, New York, p. 205. *Professor Emeritus of Biochemistry, Colorado State University, USA Michael Behe - No Scientific Literature For Evolution of Any Irreducibly Complex Molecular Machines *******www.metacafe****/watch/5302950/ “The response I have received from repeating Behe's claim about the evolutionary literature, which simply brings out the point being made implicitly by many others, such as Chris Dutton and so on, is that I obviously have not read the right books. There are, I am sure, evolutionists who have described how the transitions in question could have occurred.” And he continues, “When I ask in which books I can find these discussions, however, I either get no answer or else some titles that, upon examination, do not, in fact, contain the promised accounts. That such accounts exist seems to be something that is widely known, but I have yet to encounter anyone who knows where they exist.” David Ray Griffin - retired professor of philosophy of religion and theology What I find very persuasive, to the suggestion that the universe was designed with life in mind, is that physicists find many processes in a cell operate at the 'near optimal' capacities allowed in any physical system: William Bialek - Professor Of Physics - Princeton University: Excerpt: "A central theme in my research is an appreciation for how well things “work” in biological systems. It is, after all, some notion of functional behavior that distinguishes life from inanimate matter, and it is a challenge to quantify this functionality in a language that parallels our characterization of other physical systems. Strikingly, when we do this (and there are not so many cases where it has been done!), the performance of biological systems often approaches some limits set by basic physical principles. While it is popular to view biological mechanisms as an historical record of evolutionary and developmental compromises, these observations on functional performance point toward a very different view of life as having selected a set of near optimal mechanisms for its most crucial tasks.,,,The idea of performance near the physical limits crosses many levels of biological organization, from single molecules to cells to perception and learning in the brain,,,," *******www.princeton.edu/~wbialek/wbialek.html Physicists Finding Perfection… in Biology — June 1st, 2009 by Biologic Staff Excerpt: "biological processes tend to be optimal in cases where this can be tested." *******biologicinstitute****/2009/06/01/physicists-finding-perfection-in-biology/ Also of note: There is a fairly substantial economic payoff to be had for presupposing superior 'Intelligent Design' in life, as is testified to by the burgeoning field of Biomimicry: Biomimicry - Superior Designs That Were Found In Life *******docs.google****/Doc?docid=0AYmaSrBPNEmGZGM4ejY3d3pfNDBkZ3Nwcnd0Yw&hl=en Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/2009/10/intelligent-design-anthropic-hypothesis_19.html
8 Jan 2011
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Entire video: Creation/Evolution: Natural Limits to Biological Change - Dr. Raymond G. Bohlin - video (presentation starts at the 13:00 minute mark of video) *******www.youtube****/watch?v=Dk9wmQP7SdM&feature=bf_prev&list=SP9C519B84FE6C1202 With a Startling Candor, Oxford Scientist Admits a Gaping Hole in Evolutionary Theory - November 2011 Excerpt: As of now, we have no good theory of how to read [genetic] networks, how to model them mathematically or how one network meshes with another; worse, we have no obvious experimental lines of investigation for studying these areas. There is a great deal for systems biology to do in order to produce a full explanation of how genotypes generate phenotypes,,, *******www.evolutionnews****/2011/11/with_a_startling_candor_oxford052821.html The next evolutionary synthesis: Jonathan BL Bard (2011) Excerpt: We now know that there are at least 50 possible functions that DNA sequences can fulfill [8], that the networks for traits require many proteins and that they allow for considerable redundancy [9]. The reality is that the evolutionary synthesis says nothing about any of this; for all its claim of being grounded in DNA and mutation, it is actually a theory based on phenotypic traits. This is not to say that the evolutionary synthesis is wrong, but that it is inadequate – it is really only half a theory! *******www.biosignaling****/content/pdf/1478-811X-9-30.pdf New level of genetic diversity in human RNA sequences uncovered Excerpt: A detailed comparison of DNA and RNA in human cells has uncovered a surprising number of cases where the corresponding sequences are not, as has long been assumed, identical. The RNA-DNA differences generate proteins that do not precisely match the genes that encode them.,,, Nearly half of the RDDs uncovered in the new study cannot be explained by the activity of deaminase enzymes, however, indicating that unknown processes must be modifying the RNA sequence, either during or after transcription. ,,, Although all of the individuals analyzed in the study had a large number of RDDs, there was a great deal of variability in the specific RDDs found in each person's genetic material." *******www.physorg****/news/2011-05-genetic-diversity-human-rna-sequences.html The Fate of Darwinism: Evolution After the Modern Synthesis - David J. Depew and Bruce H. Weber - 2011 Excerpt: We trace the history of the Modern Evolutionary Synthesis, and of genetic Darwinism generally, with a view to showing why, even in its current versions, it can no longer serve as a general framework for evolutionary theory. The main reason is empirical. Genetical Darwinism cannot accommodate the role of development (and of genes in development) in many evolutionary processes.,,, *******www.springerlink****/content/845x02v03g3t7002/ Modern Synthesis of Neo-Darwinism Is Dead - No Evidence For Body Plan Morphogenesis From Embryonic Mutations - Paul Nelson - video *******www.metacafe****/watch/5548184/ In Embryo Development, Non-DNA Information Is at Least as Important as DNA - Jonathan Wells - May 2012 Excerpt: Evidence shows that non-DNA developmental information can be inherited in several ways. For example, it can be inherited through chromatin modifications, which affect gene expression without altering underlying DNA sequences. Another example is cytoplasmic inheritance, which involves cytoskeletal patterns and localization of intracellular molecules. Still another example is cortical inheritance, which involves membrane patterns. *******www.evolutionnews****/2012/05/in_embryo_devel060031.html “Live memory” of the cell, the other hereditary memory of living systems - 2005 Excerpt: To understand this notion of “live memory”, its role and interactions with DNA must be resituated; indeed, operational information belongs as much to the cell body and to its cytoplasmic regulatory protein components and other endogenous or exogenous ligands as it does to the DNA database. We will see in Section 2, using examples from recent experiments in biology, the principal roles of “live memory” in relation to the four aspects of cellular identity, memory of form, hereditary transmission and also working memory. *******www.ncbi.nlm.nih.gov/pubmed/15888340 Poly-Functional Complexity equals Poly-Constrained Complexity ********docs.google****/document/d/1xkW4C7uOE8s98tNx2mzMKmALeV8-348FZNnZmSWY5H8/edit Systems biology: Untangling the protein web - July 2009 Excerpt: Vidal thinks that technological improvements — especially in nanotechnology, to generate more data, and microscopy, to explore interaction inside cells, along with increased computer power — are required to push systems biology forward. "Combine all this and you can start to think that maybe some of the information flow can be captured," he says. But when it comes to figuring out the best way to explore information flow in cells, Tyers jokes that it is like comparing different degrees of infinity. "The interesting point coming out of all these studies is how complex these systems are — the different feedback loops and how they cross-regulate each other and adapt to perturbations are only just becoming apparent," he says. "The simple pathway models are a gross oversimplification of what is actually happening." *******www.nature****/nature/journal/v460/n7253/full/460415a.html Stephen Meyer - Functional Proteins And Information For Body Plans - video *******www.metacafe****/watch/4050681 Dr. Stephen Meyer comments at the end of the preceding video,,, ‘Now one more problem as far as the generation of information. It turns out that you don’t only need information to build genes and proteins, it turns out to build Body-Plans you need higher levels of information; Higher order assembly instructions. DNA codes for the building of proteins, but proteins must be arranged into distinctive circuitry to form distinctive cell types. Cell types have to be arranged into tissues. Tissues have to be arranged into organs. Organs and tissues must be specifically arranged to generate whole new Body-Plans, distinctive arrangements of those body parts. We now know that DNA alone is not responsible for those higher orders of organization. DNA codes for proteins, but by itself it does insure that proteins, cell types, tissues, organs, will all be arranged in the body. And what that means is that the Body-Plan morphogenesis, as it is called, depends upon information that is not encoded on DNA. Which means you can mutate DNA indefinitely. 80 million years, 100 million years, til the cows come home. It doesn’t matter, because in the best case you are just going to find a new protein some place out there in that vast combinatorial sequence space. You are not, by mutating DNA alone, going to generate higher order structures that are necessary to building a body plan. So what we can conclude from that is that the neo-Darwinian mechanism is grossly inadequate to explain the origin of information necessary to build new genes and proteins, and it is also grossly inadequate to explain the origination of novel biological form.’ - Stephen Meyer - (excerpt taken from Meyer/Sternberg vs. Shermer/Prothero debate - 2009) "Charles Darwin said (paraphrase), 'If anyone could find anything that could not be had through a number of slight, successive, modifications, my theory would absolutely break down.' Well that condition has been met time and time again. Basically every gene, every protein fold. There is nothing of significance that we can show that can be had in a gradualist way. It's a mirage. None of it happens that way. - Doug Axe PhD. Nothing In Molecular Biology Is Gradual - Doug Axe PhD. *******www.metacafe****/watch/5347797/ From Jerry Coyne, More Table-Pounding, Hand-Waving - May 2012 Excerpt: "More than 6 percent of genes found in humans simply aren't found in any form in chimpanzees. There are over fourteen hundred novel genes expressed in humans but not in chimps." Jerry Coyne - ardent and 'angry' neo-Darwinist - professor at the University of Chicago in the department of ecology and evolution for twenty years. He specializes in evolutionary genetics. *******www.evolutionnews****/2012/05/from_jerry_coyn060271.html Study Reports a Whopping "23% of Our Genome" Contradicts Standard Human-Ape Evolutionary Phylogeny - Casey Luskin - June 2011 Excerpt: For about 23% of our genome, we share no immediate genetic ancestry with our closest living relative, the chimpanzee. This encompasses genes and exons to the same extent as intergenic regions. We conclude that about 1/3 of our genes started to evolve as human-specific lineages before the differentiation of human, chimps, and gorillas took place. (of note; 1/3 of our genes is equal to about 7000 genes that we do not share with chimpanzees) *******www.evolutionnews****/2011/06/study_reports_a_whopping_23_of047041.html Could Chance Arrange the Code for (Just) One Gene? Excerpt: "our minds cannot grasp such an extremely small probability as that involved in the accidental arranging of even one gene (10^-236)." *******www.creationsafaris****/epoi_c10.htm Guy Walks Into a Bar and Thinks He's a Chimpanzee: The Unbearable Lightness of Chimp-Human Genome Similarity - Richard Sternberg - May 2009 *******www.evolutionnews****/2009/05/guy_walks_into_a_bar_and_think020401.html The Gorilla Who Broke the Tree - Doug Axe PhD. - March 2012 Excerpt: Well, the recent publication of the gorilla genome sequence shows that the expected pattern just isn’t there. Instead of a nested hierarchy of similarities, we see something more like a mosaic. According to a recent report [1], “In 30% of the genome, gorilla is closer to human or chimpanzee than the latter are to each other…” That’s sufficiently difficult to square with Darwin’s tree that it ought to bring the whole theory into question. And in an ideal world where Darwinism is examined the way scientific theories ought to be examined, I think it would. But in the real world things aren’t always so simple. *******www.biologicinstitute****/post/19703401390/the-gorilla-who-broke-the-tree Chimps are not like humans - May 2004 Excerpt: the International Chimpanzee Chromosome 22 Consortium reports that 83% of chimpanzee chromosome 22 proteins are different from their human counterparts,,, The results reported this week showed that "83% of the genes have changed between the human and the chimpanzee—only 17% are identical—so that means that the impression that comes from the 1.2% [sequence] difference is [misleading]. In the case of protein structures, it has a big effect," Sakaki said. *******cmbi.bjmu.edu.cn/news/0405/119.htm Chimp chromosome creates puzzles - 2004 Excerpt: However, the researchers were in for a surprise. Because chimps and humans appear broadly similar, some have assumed that most of the differences would occur in the large regions of DNA that do not appear to have any obvious function. But that was not the case. The researchers report in 'Nature' that many of the differences were within genes, the regions of DNA that code for proteins. 83% of the 231 genes compared had differences that affected the amino acid sequence of the protein they encoded. And 20% showed "significant structural changes". In addition, there were nearly 68,000 regions that were either extra or missing between the two sequences, accounting for around 5% of the chromosome.,,, "we have seen a much higher percentage of change than people speculated." The researchers also carried out some experiments to look at when and how strongly the genes are switched on. 20% of the genes showed significant differences in their pattern of activity. *******www.nature****/news/1998/040524/full/news040524-8.html Eighty percent of proteins are different between humans and chimpanzees; Gene; Volume 346, 14 February 2005: *******www.ncbi.nlm.nih.gov/pubmed/15716009 Further notes: Falsification Of Neo-Darwinism by Quantum Entanglement/Information ********docs.google****/document/d/1p8AQgqFqiRQwyaF8t1_CKTPQ9duN8FHU9-pV4oBDOVs/edit Let There Be Light - Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/2012/02/let-there-be-light.html
2 Jun 2012
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Download for free: *******bit.ly/MolBioCell5thPDFFree In Molecular Biology of the Cell 5th Edition PDF, new material has been included on many topics, ranging from epigenetics, histone modifications, small RNAs, and comparative genomics, to genetic noise, cytoskeletal dynamics, cell-cycle control, apoptosis, stem cells, and novel cancer therapies. This book gives readers a conceptual framework for the mass of information that we now have about cells. Release information: Genre: Biological Science Type: PDF Release: November 16, 2007. Language: English Pages: 1725 (in PDF) Size: 220 MB Authors: Bruce Alberts, Alexander Johnson, Julian Lewis, Martin Raff, Keith Roberts, Peter Walter =========================================== Download for free: *******bit.ly/MolBioCell5thPDFFree =========================================== Molecular Biology of the Cell 5th Edition PDF Ebook Free Download Additional tags: alberts cell biology 5th edition alberts molecular biology of the cell 5th edition biology of the cell alberts molecular biology of the cell 5th edition Molecular Biology of the Cell 5th Edition download molecular biology of the cell 5th edition pdf Molecular Biology of the Cell 5th Edition pdf download molecular biology of the cell by bruce alberts molecular biology of the cell ebook Molecular Biology of the Cell fifth Molecular Biology of the Cell fifth edition molecular biology of the cell pdf the molecular biology of the cell 5th edition
11 Jun 2013
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Quantum Teleportation - IBM Research Page *******www.research.ibm****/quantuminfo/teleportation/ Explaining Information Transfer in Quantum Teleportation: Armond Duwell †‡ University of Pittsburgh Excerpt: In contrast to a classical bit, the description of a qubit requires an infinite amount of information. The amount of information is infinite because two real numbers are required in the expansion of the state vector of a two state quantum system (Jozsa 1997, 1) --- Concept 2. is used by Bennett, et al. Recall that they infer that since an infinite amount of information is required to specify a qubit, an infinite amount of information must be transferred to teleport. *******www.cas.umt.edu/phil/faculty/duwell/DuwellPSA2K.pdf The Capabilities of Chaos and Complexity: David L. Abel - Null Hypothesis For Information Generation - 2009 To focus the scientific communitys attention on its own tendencies toward overzealous metaphysical imagination bordering on wish-fulfillment, we propose the following readily falsifiable null hypothesis, and invite rigorous experimental attempts to falsify it: Physicodynamics cannot spontaneously traverse The Cybernetic Cut: physicodynamics alone cannot organize itself into formally functional systems requiring algorithmic optimization, computational halting, and circuit integration. *******www.pubmedcentral.nih.gov/articlerender.fcgi?artid=2662469 *******mdpi****/1422-0067/10/1/247/ag Astonishing DNA complexity demolishes neo-Darwinism Alex Williams excerpt of paper: The astonishing complexity of the dynamic information storage capacity of the DNA/chromosome system is, in itself, a marvel of engineering design. Such a magnificent solution to such a monster logistics problem could surely only come from a Master Designer. But the nature of the majority of this information poses an impossible conundrum for neo-Darwinists. *******creation****/images/pdfs/tj/j21_3/j21_3_111-117.pdf Intelligent Design - The Anthropic Hypothesis *******lettherebelight-77.blogspot****/
9 Jan 2010
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